PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71427.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 84aa    MW: 9619.17 Da    PI: 8.5215
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71427.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.77.3e-0719522155
                HHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 21 eeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                ++L +llP+ +  ++  K s   +Le+++eYI++Lq
  EPS71427.1 19 SQLHRLLPPaP--PSISKISANKVLEETCEYIRKLQ 52
                79*******55..68899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.032151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-61466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.2E-81670IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    Send to blast
TRRRSSRPIS DDQILRLVSQ LHRLLPPAPP SISKISANKV LEETCEYIRK LQREIEDLST  60
RLSQLLLTVD EESPEAAIIR ALIM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010551862.11e-26PREDICTED: transcription factor PRE1-like
SwissprotQ9LJX14e-26PRE5_ARATH; Transcription factor PRE5
TrEMBLS8EFN76e-52S8EFN7_9LAMI; Transcription factor style2.1 (Fragment)
STRINGPOPTR_0017s11760.15e-25(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.17e-23bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]